Program blastn blastp blastx tblastn tblastx Database P. pacificus *Assembly Freeze 1* supercontigs P. pacificus *Assembly Freeze 1* contigs HYBRID1 Assembly (Sanger+454) supercontigs HYBRID1 Assembly (Sanger+454) contigs HYBRID1 proteomics gene models, proteins HYBRID1 proteomics gene models, transcripts Freeze 1 gene models (SNAP), proteins Freeze 1 gene models (SNAP), transcripts Freeze 1 gene models (SNAP+AUGUSTUS consensus), proteins Freeze 1 gene models (SNAP+AUGUSTUS consensus), transcripts P. entemophagus low-coverage *Assembly Freeze 1* P. pacifcus washington P. maupasi genome P. pacificus ESTGenes P. pacificus BACS P. pacificus Fosmids
Enter sequence below in FASTA format Or load it from disk
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15) Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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